BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E05SP1|AL429910
(635 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 191 2e-48
>3x_Contig1574
Length = 8021
Score = 191 bits (96), Expect = 2e-48
Identities = 503/629 (79%), Gaps = 10/629 (1%)
Strand = Plus / Plus
Query: 5 gatatttggta-attggaaaggtgtaggaagtttstttttattgggatatattgatttat 63
||||||||||| ||| ||||||| || |||||| |||||||| |||||||| ||||||
Sbjct: 7165 gatatttggtacattcgaaaggtctaccaagtttctttttattccgatatattcatttat 7224
Query: 64 gatgcgattgataggtgcgagggttgaagtaatggtgtgaatggatgcggatttgcgctg 123
|| |||||||||||| | | ||||||||||||||||| ||||||| | ||||| |||
Sbjct: 7225 cat-cgattgataggtcc-acggttgaagtaatggtgtcaatggat-ccgattt--cctg 7279
Query: 124 tgaagtaaaattagtaagggattgcgaatgctgtgaggggaaaatgaaataagtgggttt 183
| ||||||||||||||| ||||| ||||| || ||| |||||||| |||||| || |||
Sbjct: 7280 tcaagtaaaattagtaacggatt-cgaat-ctctgacgggaaaatcaaataactgccttt 7337
Query: 184 gatttgtgttaatttgatagtgtaaatggttaggtaagttttgagagaatttggtatggg 243
|||||| ||||||| ||| | ||||| |||| ||| |||||| | |||||| ||| |
Sbjct: 7338 catttgtcttaatttcatactctaaatccttagctaacttttgacacaatttgctatccg 7397
Query: 244 agtgatagggaattgtgggatttagttttaaggatagtaggaatgagattaaggggttag 303
||| ||| | |||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 7398 agtcatacgcaattgtcggatttagttttaacgatagtagcaatgagattaacccgttag 7457
Query: 304 aggtgtggtggaatgggtttggatgggataggaattgattttggagaagattgtagaagg 363
| || | || ||| ||||||| ||| ||||||||||||||||||||||| || |
Sbjct: 7458 acgtctcctgcaatccctttggatcccataccaattgattttggagaagattgtacaacg 7517
Query: 364 ggatgtgtaaagtgaagagatggtggttgagaattaggtagtgttggaaaagttgttgta 423
|||| | ||||||||||| || | ||| | ||||||||||| |||||||| || || ||
Sbjct: 7518 ggatctctaaagtgaagacatcctcgttcacaattaggtagtcttggaaaacttcttcta 7577
Query: 424 gatgtgtgagaaggtggatatgatgtgtttggggtaagggttggaagtgggagttagtga 483
|||||||| || | |||| || | ||| || ||| ||| || ||||| ||| | |
Sbjct: 7578 catgtgtgacaacctccatatcatctctttcggctaaccgttccaactgggacttactca 7637
Query: 484 sgtggttattgaagaaaatgtggtattggggatagttgggatggtgctaattggtgtaat 543
||||||||||||||||| ||||||| | ||| ||||||| || ||||| |||||||
Sbjct: 7638 cctggttattgaagaaaatctggtattcgccatacttgggatcctg-taattcgtgtaat 7696
Query: 544 aggtgttgaatggtatggtgagtgggtttgaacataggataaagatttgaaatgtgggat 603
|||| |||||| |||| | ||||||||| || |||| ||||| |||| |||||||| ||
Sbjct: 7697 aggtcttgaatcgtatcctcagtgggtttcaa-atagcataaacatttcaaatgtggcat 7755
Query: 604 tggatgtgtgygaatattgtgaagtttat 632
||||| | || ||||||| | ||||||||
Sbjct: 7756 tggatctctgtgaatattctcaagtttat 7784
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4452
Number of Sequences: 1807
Number of extensions: 4452
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 635
length of database: 10,358,551
effective HSP length: 16
effective length of query: 619
effective length of database: 10,329,639
effective search space: 6394046541
effective search space used: 6394046541
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)